Package: clustree
Type: Package
Title: Visualise Clusterings at Different Resolutions
Version: 0.5.1
Date: 2023-11-05
Authors@R: 
    c(person("Luke", "Zappia", role = c("aut", "cre"),
             email = "luke@lazappi.id.au",
             comment = c(ORCID = "0000-0001-7744-8565")),
      person("Alicia", "Oshlack", role = c("aut"),
             email = "alicia.oshlack@petermac.org",
             comment = c(ORCID = "0000-0001-9788-5690")),
      person("Andrea", "Rau", role = c("ctb"),
             email = "andrea.rau@inra.fr"),
      person("Paul", "Hoffman", role = c("ctb"),
             email = "phoffman@nygenome.org",
             comment = c(ORCID = "0000-0002-7693-8957")))
Maintainer: Luke Zappia <luke@lazappi.id.au>
Description: Deciding what resolution to use can be a difficult
        question when approaching a clustering analysis. One way to
        approach this problem is to look at how samples move as the
        number of clusters increases. This package allows you to
        produce clustering trees, a visualisation for interrogating
        clusterings as resolution increases.
License: GPL-3
Encoding: UTF-8
LazyData: true
URL: https://github.com/lazappi/clustree,
        https://lazappi.github.io/clustree/
BugReports: https://github.com/lazappi/clustree/issues
VignetteBuilder: knitr
Depends: R (>= 3.5), ggraph
Imports: checkmate, igraph, dplyr, grid, ggplot2 (>= 3.4.0), viridis,
        methods, rlang, tidygraph, ggrepel
Suggests: testthat (>= 2.1.0), knitr, rmarkdown, SingleCellExperiment,
        Seurat (>= 2.3.0), covr, SummarizedExperiment, pkgdown,
        spelling
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Language: en-GB
Config/pak/sysreqs: libfontconfig1-dev libfreetype6-dev libglpk-dev
        libicu-dev libxml2-dev
Repository: https://lazappi.r-universe.dev
Date/Publication: 2023-11-08 09:24:34 UTC
RemoteUrl: https://github.com/lazappi/clustree
RemoteRef: HEAD
RemoteSha: 24900bdf459c29812c716ba9f889c58685f957ed
NeedsCompilation: no
Packaged: 2026-06-04 10:21:23 UTC; root
Author: Luke Zappia [aut, cre] (ORCID: <https://orcid.org/0000-0001-7744-8565>),
  Alicia Oshlack [aut] (ORCID: <https://orcid.org/0000-0001-9788-5690>),
  Andrea Rau [ctb],
  Paul Hoffman [ctb] (ORCID: <https://orcid.org/0000-0002-7693-8957>)