Development status

The following tables show the status of the implementation of each feature in the package:

HDF5AnnData

Slot	Getter	Getter test	Setter	Setter test
X	✓	✓	✓	✓
layers	✓	✓	✓	✓
obs	✓	✓	✓	✓
obs_names	✓	✓	✓	✓
obsm	✓		✓
obsp	✓		✓
uns	✓		✓
var	✓	✓	✓	✓
var_names	✓	✓	✓	✓
varm	✓		✓
varp	✓		✓

InMemoryAnnData

Slot	Getter	Getter test	Setter	Setter test
X	✓	✓	✓	✓
layers	✓	✓	✓	✓
obs	✓	✓	✓	✓
obs_names	✓	✓	✓	✓
obsm	✓		✓
obsp	✓		✓
uns	✓		✓
var	✓	✓	✓	✓
var_names	✓	✓	✓	✓
varm	✓		✓
varp	✓		✓

Seurat

Slot	Getter	Getter test	Setter	Setter test
X	✓		✓	✓
layers	✓		✓	✓
obs	✓	✓	✓
obs_names	✓	✓	✓
obsm	~		~	✓
obsp	~		~
uns	✓		~
var	✓	✓	✓
var_names	✓	✓	✓
varm	~		~	✓
varp	✓		~

SingleCellExperiment

Slot	Getter	Getter test	Setter	Setter test
X	✓		~
layers	✓	✓	~	✓
obs	✓	✓	~	✓
obs_names	✓			✓
obsm			~
obsp	✓	✓	~	✓
pca	NA	✓	NA	✓
reductions	~	NA	NA	NA
uns	✓	✓	~	✓
var	✓	✓	~	✓
var_names	✓	✓		✓
varm			~
varp	✓	✓	~	✓