Package: anndataR
Title: AnnData interoperability in R
Version: 1.3.0
Authors@R: c(
    person("Robrecht", "Cannoodt", , "rcannood@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0003-3641-729X", github = "rcannood")),
    person("Luke", "Zappia", , "luke@lazappi.id.au", role = "aut",
           comment = c(ORCID = "0000-0001-7744-8565", github = "lazappi")),
    person("Martin", "Morgan", , "mtmorgan.bioc@gmail.com", role = "aut",
           comment = c(ORCID = "0000-0002-5874-8148", github = "mtmorgan")),
    person("Louise", "Deconinck", , "louise.deconinck@gmail.com", role = "aut",
           comment = c(ORCID = "0000-0001-8100-6823", github = "LouiseDck")),
    person("Danila", "Bredikhin", , "danila.bredikhin@embl.de", role = "ctb",
           comment = c(ORCID = "0000-0001-8089-6983", github = "gtca")),
    person("Isaac", "Virshup", role = "ctb",
           comment = c(ORCID = "0000-0002-1710-8945", github = "ivirshup")),
    person("Brian", "Schilder", , "brian_schilder@alumni.brown.edu", role = "ctb",
           comment = c(ORCID = "0000-0001-5949-2191", github = "bschilder")),
    person("Chananchida", "Sang-aram", role = "ctb",
           comment = c(ORCID = "0000-0002-0922-0822", github = "csangara")),
    person("Artür", "Manukyan", role = "ctb",
           comment = c(ORCID = "0000-0002-0441-9517", github = "Artur-man")),
    person("Hugo", "Gruson", role = "ctb",
           comment = c(ORCID = "0000-0002-4094-1476", github = "Bisaloo")),
    person("Data Intuitive", , , "info@data-intuitive.com", role = "fnd"),
    person("Chan Zuckerberg Initiative", role = "fnd"),
    person("scverse consortium", role = "spn")
  )
Description: Bring the power and flexibility of AnnData to the R
        ecosystem, allowing you to effortlessly manipulate and analyse
        your single-cell data. This package lets you work with backed
        h5ad and zarr files, directly access various slots (e.g. X,
        obs, var), or convert the data into SingleCellExperiment and
        Seurat objects.
License: MIT + file LICENSE
URL: https://anndataR.scverse.org/, https://github.com/scverse/anndataR
BugReports: https://github.com/scverse/anndataR/issues
Depends: R (>= 4.5.0)
Imports: cli, lifecycle, Matrix, methods, purrr, R6 (>= 2.4.0),
        reticulate (>= 1.41.1), rlang, stats
Suggests: BiocFileCache, BiocStyle, DelayedArray, HDF5Array, knitr,
        processx, rhdf5 (>= 2.52.1), Rarr (>= 1.11.12), rmarkdown,
        S4Vectors, Seurat, SeuratObject, SingleCellExperiment,
        spelling, SummarizedExperiment, testthat (>= 3.0.0), vctrs,
        withr, yaml
VignetteBuilder: knitr
biocViews: SingleCell, DataImport, DataRepresentation
Config/Needs/website: pkgdown, tibble, knitr, rprojroot, stringr,
        readr, purrr, dplyr, tidyr, rmarkdown
Config/testthat/edition: 3
Encoding: UTF-8
Roxygen: list(markdown = TRUE, r6 = TRUE)
Language: en-GB
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: libpng-dev python3
Repository: https://lazappi.r-universe.dev
Date/Publication: 2026-06-23 10:21:05 UTC
RemoteUrl: https://github.com/scverse/anndataR
RemoteRef: HEAD
RemoteSha: 07612e4f0e5c7efff05265eb916ae9ed94bf78b9
NeedsCompilation: no
Packaged: 2026-06-23 10:47:36 UTC; root
Author: Robrecht Cannoodt [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3641-729X>, github: rcannood),
  Luke Zappia [aut] (ORCID: <https://orcid.org/0000-0001-7744-8565>,
    github: lazappi),
  Martin Morgan [aut] (ORCID: <https://orcid.org/0000-0002-5874-8148>,
    github: mtmorgan),
  Louise Deconinck [aut] (ORCID: <https://orcid.org/0000-0001-8100-6823>,
    github: LouiseDck),
  Danila Bredikhin [ctb] (ORCID: <https://orcid.org/0000-0001-8089-6983>,
    github: gtca),
  Isaac Virshup [ctb] (ORCID: <https://orcid.org/0000-0002-1710-8945>,
    github: ivirshup),
  Brian Schilder [ctb] (ORCID: <https://orcid.org/0000-0001-5949-2191>,
    github: bschilder),
  Chananchida Sang-aram [ctb] (ORCID:
    <https://orcid.org/0000-0002-0922-0822>, github: csangara),
  Artür Manukyan [ctb] (ORCID: <https://orcid.org/0000-0002-0441-9517>,
    github: Artur-man),
  Hugo Gruson [ctb] (ORCID: <https://orcid.org/0000-0002-4094-1476>,
    github: Bisaloo),
  Data Intuitive [fnd],
  Chan Zuckerberg Initiative [fnd],
  scverse consortium [spn]
Maintainer: Robrecht Cannoodt <rcannood@gmail.com>